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Functional Characterization of DNA Repair Gene Variants in Live Cells Enabled Through Precision Genome Editing, Chemical Biology, and Biochemical Tools.
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Functional Characterization of DNA Repair Gene Variants in Live Cells Enabled Through Precision Genome Editing, Chemical Biology, and Biochemical Tools.
자료유형  
 학위논문
Control Number  
0017162584
International Standard Book Number  
9798384424437
Dewey Decimal Classification Number  
540
Main Entry-Personal Name  
Vasquez, Carlos Anthony.
Publication, Distribution, etc. (Imprint  
[S.l.] : University of California, San Diego., 2024
Publication, Distribution, etc. (Imprint  
Ann Arbor : ProQuest Dissertations & Theses, 2024
Physical Description  
138 p.
General Note  
Source: Dissertations Abstracts International, Volume: 86-03, Section: B.
General Note  
Advisor: Komor, Alexis.
Dissertation Note  
Thesis (Ph.D.)--University of California, San Diego, 2024.
Summary, Etc.  
요약Progress in next-generation sequencing (NGS) technologies has streamlined the detection of human genetic variations, and the identification of clinically actionable genes and pathogenic mutations has transformed precision medicine. However, only a small fraction of identified human genetic variants have been assigned a clinical classification or functionally characterized. This highlights the importance of investigating genetic variants and obtaining mechanistic insight into disease etiology and progression. Base editing is a new precision genome editing methodology that utilizes native DNA repair pathways within living cells to either fix or install genetic variants. In Chapter 2, we detail our findings which aim to provide an optimized protocol in utilizing base editing technology. Then in Chapter 3, we detail how we harness base editing to overcome many of the limitations of traditional genome editing to generate both homozygous and heterozygous isogenic cell lines of four MUTYH variants. To date, these were the first reports of successful generation of isogenic cell lines containing MUTYH variants and also the first to functionally characterize them within living cells. Finally, in Chapter 4, non-thesis-related university service garnered throughout the primary author and researcher's tenure is briefly discussed as this work has also led to both personal and professional advances.
Subject Added Entry-Topical Term  
Chemistry.
Subject Added Entry-Topical Term  
Cellular biology.
Subject Added Entry-Topical Term  
Biochemistry.
Subject Added Entry-Topical Term  
Genetics.
Index Term-Uncontrolled  
Next-generation sequencing
Index Term-Uncontrolled  
Human genetic variations
Index Term-Uncontrolled  
Live cells
Index Term-Uncontrolled  
Isogenic cell
Added Entry-Corporate Name  
University of California, San Diego Chemistry and Biochemistry
Host Item Entry  
Dissertations Abstracts International. 86-03B.
Electronic Location and Access  
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Control Number  
joongbu:658268
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