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Advances in X-Ray Scattering Interferometry and Liquid Chromatography Coupled Small Angle X-Ray Scattering Towards Exploring DNA-Protein Interactions and Bionanoengineering- [electronic resource]
Advances in X-Ray Scattering Interferometry and Liquid Chromatography Coupled Small Angle X-Ray Scattering Towards Exploring DNA-Protein Interactions and Bionanoengineering- [electronic resource]
상세정보
- 자료유형
- 학위논문
- Control Number
- 0016932368
- International Standard Book Number
- 9798380380980
- Dewey Decimal Classification Number
- 574.191
- Main Entry-Personal Name
- Rosenberg, Daniel Joshua.
- Publication, Distribution, etc. (Imprint
- [S.l.] : University of California, Berkeley., 2023
- Publication, Distribution, etc. (Imprint
- Ann Arbor : ProQuest Dissertations & Theses, 2023
- Physical Description
- 1 online resource(336 p.)
- General Note
- Source: Dissertations Abstracts International, Volume: 85-03, Section: B.
- General Note
- Advisor: Hura, Gregory;Landry, Markita P.
- Dissertation Note
- Thesis (Ph.D.)--University of California, Berkeley, 2023.
- Restrictions on Access Note
- This item must not be sold to any third party vendors.
- Summary, Etc.
- 요약This dissertation demonstrates the development and application of advanced X-ray scattering techniques toward the exploration of DNA-protein interactions and engineering bionanotechnology. Herein I describe the development of size exclusion chromatography-coupled small-angle X-ray scattering with in-line multi-angle light scattering (SEC-SAXS-MALS) and X-ray scattering interferometry (XSI). SEC-SAXS-MALS is a high-throughput, multimodal structural biology approach with integrated purification whereas XSI leverages the interference pattern between ordered gold nanoparticles (AuNPs) to calculate discrete inter-AuNP distances, effectively turning them into molecular rulers. I demonstrate the application of these techniques in the study of the single-strand break (SSB) DNA-damage repair meiotic recombination 11 (MRE11) nuclease activity, poly(ADP-ribose) polymerase 1 (PARP-1) damage recognition, activation, and inhibition, and the dynamics of the DNA-dependent protein kinase holoenzyme DNA-PK complex. Additionally, I show the versatility of these techniques in bionanoengineering by exploring the surface adsorbed morphology and nanosensing mechanisms of DNA‐functionalized single‐walled carbon nanotubes (ssDNA‐SWCNTs), and the innovation of RuBisCO assemblies. Finally, I show how these techniques provide high-throughput capabilities that enable rapid disaster responses by characterizing the Nsp7, Nsp8, and Nsp12 complexes of SARS-CoV-2 involved in replication, and the exploration of rigid monoclonal antibodies to improve detection of the SARS-CoV-2 nucleocapsid.
- Subject Added Entry-Topical Term
- Biophysics.
- Subject Added Entry-Topical Term
- Molecular physics.
- Subject Added Entry-Topical Term
- Bioengineering.
- Index Term-Uncontrolled
- Gold nanoparticles
- Index Term-Uncontrolled
- Meiotic recombination 11
- Index Term-Uncontrolled
- SARS-CoV-2
- Index Term-Uncontrolled
- Structural biology
- Index Term-Uncontrolled
- DNA-PK complex
- Index Term-Uncontrolled
- X-ray scattering interferometry
- Added Entry-Corporate Name
- University of California, Berkeley Biophysics
- Host Item Entry
- Dissertations Abstracts International. 85-03B.
- Host Item Entry
- Dissertation Abstract International
- Electronic Location and Access
- 로그인을 한후 보실 수 있는 자료입니다.
- Control Number
- joongbu:639602
MARC
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■006m o d
■007cr#unu||||||||
■020 ▼a9798380380980
■035 ▼a(MiAaPQ)AAI30491898
■040 ▼aMiAaPQ▼cMiAaPQ
■0820 ▼a574.191
■1001 ▼aRosenberg, Daniel Joshua.
■24510▼aAdvances in X-Ray Scattering Interferometry and Liquid Chromatography Coupled Small Angle X-Ray Scattering Towards Exploring DNA-Protein Interactions and Bionanoengineering▼h[electronic resource]
■260 ▼a[S.l.]▼bUniversity of California, Berkeley. ▼c2023
■260 1▼aAnn Arbor▼bProQuest Dissertations & Theses▼c2023
■300 ▼a1 online resource(336 p.)
■500 ▼aSource: Dissertations Abstracts International, Volume: 85-03, Section: B.
■500 ▼aAdvisor: Hura, Gregory;Landry, Markita P.
■5021 ▼aThesis (Ph.D.)--University of California, Berkeley, 2023.
■506 ▼aThis item must not be sold to any third party vendors.
■520 ▼aThis dissertation demonstrates the development and application of advanced X-ray scattering techniques toward the exploration of DNA-protein interactions and engineering bionanotechnology. Herein I describe the development of size exclusion chromatography-coupled small-angle X-ray scattering with in-line multi-angle light scattering (SEC-SAXS-MALS) and X-ray scattering interferometry (XSI). SEC-SAXS-MALS is a high-throughput, multimodal structural biology approach with integrated purification whereas XSI leverages the interference pattern between ordered gold nanoparticles (AuNPs) to calculate discrete inter-AuNP distances, effectively turning them into molecular rulers. I demonstrate the application of these techniques in the study of the single-strand break (SSB) DNA-damage repair meiotic recombination 11 (MRE11) nuclease activity, poly(ADP-ribose) polymerase 1 (PARP-1) damage recognition, activation, and inhibition, and the dynamics of the DNA-dependent protein kinase holoenzyme DNA-PK complex. Additionally, I show the versatility of these techniques in bionanoengineering by exploring the surface adsorbed morphology and nanosensing mechanisms of DNA‐functionalized single‐walled carbon nanotubes (ssDNA‐SWCNTs), and the innovation of RuBisCO assemblies. Finally, I show how these techniques provide high-throughput capabilities that enable rapid disaster responses by characterizing the Nsp7, Nsp8, and Nsp12 complexes of SARS-CoV-2 involved in replication, and the exploration of rigid monoclonal antibodies to improve detection of the SARS-CoV-2 nucleocapsid.
■590 ▼aSchool code: 0028.
■650 4▼aBiophysics.
■650 4▼aMolecular physics.
■650 4▼aBioengineering.
■653 ▼aGold nanoparticles
■653 ▼aMeiotic recombination 11
■653 ▼aSARS-CoV-2
■653 ▼aStructural biology
■653 ▼aDNA-PK complex
■653 ▼aX-ray scattering interferometry
■690 ▼a0786
■690 ▼a0609
■690 ▼a0202
■71020▼aUniversity of California, Berkeley▼bBiophysics.
■7730 ▼tDissertations Abstracts International▼g85-03B.
■773 ▼tDissertation Abstract International
■790 ▼a0028
■791 ▼aPh.D.
■792 ▼a2023
■793 ▼aEnglish
■85640▼uhttp://www.riss.kr/pdu/ddodLink.do?id=T16932368▼nKERIS▼z이 자료의 원문은 한국교육학술정보원에서 제공합니다.
■980 ▼a202402▼f2024
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